CDS

Accession Number TCMCG058C05164
gbkey CDS
Protein Id KAF7123362.1
Location join(3286903..3287105,3287970..3288062,3288173..3288277,3288401..3288618,3288754..3288836,3288951..3289076,3289528..3289619,3289831..3289917,3290762..3290976,3291293..3291385,3292566..3292689,3292841..3292988,3293696..3293765,3294244..3294404,3294692..3294867,3295163..3295310)
Organism Rhododendron simsii
locus_tag RHSIM_Rhsim12G0029400

Protein

Length 713aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA588298, BioSample:SAMN13241185
db_source WJXA01000012.1
Definition hypothetical protein RHSIM_Rhsim12G0029400 [Rhododendron simsii]
Locus_tag RHSIM_Rhsim12G0029400

EGGNOG-MAPPER Annotation

COG_category A
Description ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12818        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAATCTCCCGATCCTGCAATTCGAAGAGCAAATCGTGGAAACAGTGGAGCGGAACCCAGTGGTGGTAATCATAGGCGAAACGGGTTCAGGAAAGAGCACTCAGCTCTCGCAAATACTCCACAAAAGAGGCTACACCAAATCCGGTCGAGCCATCGCCGTTACGCAGCCCCGCCGAGTAGCTGCAGTCTCCGTTTCAAGACGTGTTGCACAGGAGCTTGGTGTTCGGTTTGGGGAGGAAGTGGGCTACGCAATTCGATTTGAAGATAGAACTTCAGAGAAGACATGTATCAAATATCTCACTGACGGTGTTCTTCTCCGTGAAAGCCTTTCAAACCCTGAGCTCAACCAGTATTCTGTCATTATATTAGACGAAGCCCATGAAAGAAGTCTGAACACGGATATATTGTTGGGGCTGATGAAACGGTTGATTAAAATTCGTTCAACGAATCTGAAGGTTTTAATCACTTCGGCTACTCTTGATGGTGAAAAAGTGTCAAGATTCTTCTCCAATTGTCCTATACTCAATGTTCCCGGGAAGTTATTCCCCGTCGAGATACGTTACAGCTCAGAACGCCCAACAAGTTATCTTGAATCTTCTTTGAAAACAGCCATTGCCATATGTGCTAATAATTTCGCATTGTCAGAAATACATGTTCGGGAACCAGAAGGTGATATCTTGATATTCATGACTGGACAGGATGACATAGAGAAGTTGGTCAAGAAATTGGAGGAGAGAGTTCAAAGCCTGGAGGAAGGGTCTTGCATGGATGCCGTAATTCTTCCTCTTCATGGATCTTTGCCACCTGAATTGCAGGCAAGCCTTGTTCGTGTTTTCAGTCCTCCACCTCCAAATTGCAGGCGATTTATTGTTGCTACGAACATTGCTGAAACATCTTTGACCGTAGATGGCGTTGTGTATGTTATTGATTCTGGTTATGTGAAGCAACGACAATACAACCCATCTACTGGCATGTATTCCCTTGATGTGGTCCCAATAAGCAGGGTGCAAGCTGATCAACGTGCAGGACGAGCTGGAAGAACACGTCCAGGGAAGTGCTACCGTTTATACACATCCACAGTTTACCATGAAGATTTAATGGGTGCAACGGTCCCTGAAATACAGCGGTCTTCTCTTGCTGGCACTGTTCTTTATTTGAAATCATTGGACCTCCCTGATATTGATATTCTCAAATTCGATTTTCTCGATCCTCCTTCGACTGAGGCGTTAGAAGATGCTCTTAAGCAACTGTATCTTATTGATGCTATTGACGAAAATGGATCGATTACAAGTATTGGACAGACGATGGCAGAGCTACCTTTGGAACCTTCACTCTCAAGAACCCTAATCGAGGCAAATGAGTATGGTTGCTTATCCCAAGCCTTGACTGTTGCTGCTATGCTATCGGCGGAAACCTCATTGCTTCCTGGTACAAGCAAGAGCACTGACAAGAAGAGGAAGCACGAACCTTCGGACCTTCCTGATGGTTCTGGTTGGGGTGATCACATCCAATTGCTTCAGATATATGAGCTTTGGGATCAGAGAAATTATGATGTGGAGTGGTGCAAAGATAACAACTTACAGGTGCGAGGTATGAAGTTTGTCAGAGATGTCAGGAAACAGTTATCTCAAATTATGCAGAAGATAGCAAAAGGGTCCTTAGATGTACGAACAAATGGAAGACGGAAAGAAAGCCAGGAGGATTATAGAAACTTGAGGAAGTCTTTGTGCGTGGGATATGCAAACCAGCTAGCTGAGAGAATGATGCGTCACAATGGTTACCGGACTCTTGGTTTTAAGCCCCAACTTGTTCAGGTGCATCCGTCCTCTGTGCTGAAAACAGATGAAGAGGGGATGCTCCCAAATTATGTCGTCTACCATGAACTTATTTCTACCACGCGTCCATTTATGCGGAATCTGTGCGCAGTAGAGATGCGATGGGTCATGCCCATCTTAAAGAAGCTAGAGAAACTAAACATCACCAAACTCAGTGGTGGGTCTGTTCGGTCCGAAGAGCAAACCAAGGGAGAAAATCCGAGTTTGCCAGAGAAAGAAGTCGGTGTTGCCACTCCTGATGACCGTGAGAGCCGCATACAAGCAGCGCGGGATCGTTTCCTCTCCCGTAAAACAAAGGGCTAG
Protein:  
MANLPILQFEEQIVETVERNPVVVIIGETGSGKSTQLSQILHKRGYTKSGRAIAVTQPRRVAAVSVSRRVAQELGVRFGEEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSNPELNQYSVIILDEAHERSLNTDILLGLMKRLIKIRSTNLKVLITSATLDGEKVSRFFSNCPILNVPGKLFPVEIRYSSERPTSYLESSLKTAIAICANNFALSEIHVREPEGDILIFMTGQDDIEKLVKKLEERVQSLEEGSCMDAVILPLHGSLPPELQASLVRVFSPPPPNCRRFIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSTGMYSLDVVPISRVQADQRAGRAGRTRPGKCYRLYTSTVYHEDLMGATVPEIQRSSLAGTVLYLKSLDLPDIDILKFDFLDPPSTEALEDALKQLYLIDAIDENGSITSIGQTMAELPLEPSLSRTLIEANEYGCLSQALTVAAMLSAETSLLPGTSKSTDKKRKHEPSDLPDGSGWGDHIQLLQIYELWDQRNYDVEWCKDNNLQVRGMKFVRDVRKQLSQIMQKIAKGSLDVRTNGRRKESQEDYRNLRKSLCVGYANQLAERMMRHNGYRTLGFKPQLVQVHPSSVLKTDEEGMLPNYVVYHELISTTRPFMRNLCAVEMRWVMPILKKLEKLNITKLSGGSVRSEEQTKGENPSLPEKEVGVATPDDRESRIQAARDRFLSRKTKG